The detailed information of tRNA gene sequence


Sequence ID>SRA1008110
Genome IDSRR020490.207703
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 54
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtccttttt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATAGGGTAATCCCCT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttaagtctc
Secondary structure (Cloverleaf model)
>SRA1008110	Ser	GCT
                   t      GCCA gttaagtctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATAGGGTAATCCCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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