The detailed information of tRNA gene sequence


Sequence ID>SRA1008115
Genome IDSRR020490.208801
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 191
End posion on genome 116
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gattgtcttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCATCTGGTTTACATCCAGAGGGTCGGGAGTTCGAGC
CTCTCACCGCCCACCA
Downstream region at tRNA end position 
ttgaataaaa
Secondary structure (Cloverleaf model)
>SRA1008115	Val	TAC
                   t      ACCA ttgaataaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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