The detailed information of tRNA gene sequence


Sequence ID>SRA1008130
Genome IDSRR020490.218039
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 147
End posion on genome 58
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaaaataat
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTTAAAGCGCACGCTTGGAAAGTGTGTATACGAGCAATCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttttaaaaat
Secondary structure (Cloverleaf model)
>SRA1008130	Ser	GGA
                   t      GCCA ttttaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TATACGAGCAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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