The detailed information of tRNA gene sequence


Sequence ID>SRA1008136
Genome IDSRR020490.219152
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 203
End posion on genome 276
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttaactattc
tRNA gene sequence 
GCCGGAGTAGCTTCAGTGGTAGAGCAGCCGCCTTGTAAGCGGCAGGTCAGGGGTTCAACT
CCCCTCTCCGGCTCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1008136	Thr	TGT
                   c      TCnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     T C C C C     A
      G A C        A      | | | | |     A
    T       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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