The detailed information of tRNA gene sequence


Sequence ID>SRA1008140
Genome IDSRR020490.221948
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 166
End posion on genome 93
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgctaattaa
tRNA gene sequence 
GGCATTGTGGCCGAGTGGCTAGGCAGGGCTCTGCAAAAGCTCCTACAGCGGTTCGAATCC
GCTCGATGCCTCAA
Downstream region at tRNA end position 
gatacaactt
Secondary structure (Cloverleaf model)
>SRA1008140	Cys	GCA
                   a      TCAA gatacaactt
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     T + G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     CTAC
                    G - C
                    G + T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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