The detailed information of tRNA gene sequence


Sequence ID>SRA1008142
Genome IDSRR020490.222738
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 3
End posion on genome 77
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
CGGTCATTAGCGCAGTCTGGCTAGCGTACTGGTTTTGGGAACCAGGGTCGCAGGTTCGAA
TCCTGCATGACCGACat
Downstream region at tRNA end position 
gcgggtgtag
Secondary structure (Cloverleaf model)
>SRA1008142	Pro	TGG
                   g      ACat gcgggtgtag
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     T - A          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     G
  T         C G C G       G C A G G     C
  G         | | | +                 T T
  G         G C G T
    C T A          A     GGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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