The detailed information of tRNA gene sequence


Sequence ID>SRA1008148
Genome IDSRR020490.225510
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 84
End posion on genome 172
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgttttta
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATAGGCAACCCCTAT
CGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tactactgtt
Secondary structure (Cloverleaf model)
>SRA1008148	Ser	GCT
                   a      GCCA tactactgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGCAACCCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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