The detailed information of tRNA gene sequence


Sequence ID>SRA1008150
Genome IDSRR020490.225655
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 165
End posion on genome 91
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctctccaaa
tRNA gene sequence 
GCGCGCTTAGCTCAGTGGTAGAGCACATCGTTCACACCGATGGGGTCGTTGGTTCGAATC
CAGCAGTGCGCACCA
Downstream region at tRNA end position 
ttttctttcc
Secondary structure (Cloverleaf model)
>SRA1008150	Val	CAC
                   a      ACCA ttttctttcc
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          T A
                    T     C G A C C     A
        G A        A      | + | | |     G
      T     C T C G       G T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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