The detailed information of tRNA gene sequence


Sequence ID>SRA1008153
Genome IDSRR020490.226360
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 205
End posion on genome 129
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaaagaatt
tRNA gene sequence 
AGGGGTGTAGCTCTAATTGGCAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGAGTTCGAA
TCTCACCACCCCTGCTA
Downstream region at tRNA end position 
gaggtaatta
Secondary structure (Cloverleaf model)
>SRA1008153	Trp	CCA
                   t      GCTA gaggtaatta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A C T C     A
      A A T        A      | | | | |     G
    T       C T C G       G T G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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