The detailed information of tRNA gene sequence


Sequence ID>SRA1008161
Genome IDSRR020490.229527
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 251
End posion on genome 176
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tcaagtgatc
tRNA gene sequence 
GCCTGCGTAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCACCGGTTCAAAT
CCGGTCGTAGGCTCTA
Downstream region at tRNA end position 
taaaaaagat
Secondary structure (Cloverleaf model)
>SRA1008161	Thr	GGT
                   c      TCTA taaaaaagat
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     C - G
                     G - C          T A
                    T     T G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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