The detailed information of tRNA gene sequence


Sequence ID>SRA1008181
Genome IDSRR020490.242029
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 55
End posion on genome 130
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aacattttat
tRNA gene sequence 
GCCCTTGTAGCTCAGCTGGTAGAGCAATTGATTTGTAATCAATAGGTCCGCGGTTCGAAT
CCGTGCGGGGGCACCA
Downstream region at tRNA end position 
ttttcttaat
Secondary structure (Cloverleaf model)
>SRA1008181	Thr	TGT
                   t      ACCA ttttcttaat
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          T A
                    T     G T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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