The detailed information of tRNA gene sequence


Sequence ID>SRA1008193
Genome IDSRR020490.246874
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 206
End posion on genome 281
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttctttacgt
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGGAGTTCGAGC
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
acannnnnnn
Secondary structure (Cloverleaf model)
>SRA1008193	Ala	TGC
                   t      ACCA acannnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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