The detailed information of tRNA gene sequence


Sequence ID>SRA1008196
Genome IDSRR020490.248815
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 127
End posion on genome 203
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatctacaa
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAAGTTCAAA
TCTTCCCCCCGCCACCA
Downstream region at tRNA end position 
attactgcaa
Secondary structure (Cloverleaf model)
>SRA1008196	Met	CAT
                   a      ACCA attactgcaa
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T T C     A
      T G A        A      | | | | |     A
    C       C G A G       G G A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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