The detailed information of tRNA gene sequence


Sequence ID>SRA1008212
Genome IDSRR020490.259346
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 9
End posion on genome 98
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nntcaaatat
tRNA gene sequence 
GGAGAGATGGCCGAGAGGTTGAAGGCGCCGCTCTCGAAAAGCGGTATGCCCGTAAGGGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cttagcctaa
Secondary structure (Cloverleaf model)
>SRA1008212	Ser	CGA
                   t      GCCA cttagcctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGCCCGTAAGGGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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