The detailed information of tRNA gene sequence


Sequence ID>SRA1008214
Genome IDSRR020490.260985
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 133
End posion on genome 47
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttacttcaag
tRNA gene sequence 
GGAAAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTGATAGCTAAAACTAT
CCGTGGGTTCGAATCCCACCCTTTCCGtat
Downstream region at tRNA end position 
ttgtgttgat
Secondary structure (Cloverleaf model)
>SRA1008214	Ser	CGA
                   g      Gtat ttgtgttgat
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGATAGCTAAAACTATCC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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