The detailed information of tRNA gene sequence


Sequence ID>SRA1008217
Genome IDSRR020490.262940
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 249
End posion on genome 174
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atacaataaT
tRNA gene sequence 
GCTTCCTTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTGGGCCGCAGGTTCGAA
TCCTGCAGGAAGCGTaa
Downstream region at tRNA end position 
tattaaaaaa
Secondary structure (Cloverleaf model)
>SRA1008217	Arg	TCT
                   T      GTaa tattaaaaaa
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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