The detailed information of tRNA gene sequence


Sequence ID>SRA1008227
Genome IDSRR020490.267387
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 179
End posion on genome 103
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agttaacgtc
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCAAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
tcatgaaaaa
Secondary structure (Cloverleaf model)
>SRA1008227	Pro	TGG
                   c      ACCA tcatgaaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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