The detailed information of tRNA gene sequence


Sequence ID>SRA1008230
Genome IDSRR020490.270339
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 183
End posion on genome 259
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acaataattt
tRNA gene sequence 
GGGGTAGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCGAG
TCCCGTCTATCCCGCAA
Downstream region at tRNA end position 
ctttcgatga
Secondary structure (Cloverleaf model)
>SRA1008230	Asp	GTC
                   t      GCAA ctttcgatga
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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