The detailed information of tRNA gene sequence


Sequence ID>SRA1008238
Genome IDSRR020490.274454
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 170
End posion on genome 97
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taattctaaT
tRNA gene sequence 
GCCGGTGTAGCTCAGGGGTAGAGCAACTGATTCGTAACCAGTAGGTCGGTGGTTCAATTC
CACTCATCGGCATtc
Downstream region at tRNA end position 
aaaaagatgt
Secondary structure (Cloverleaf model)
>SRA1008238	Thr	CGT
                   T      ATtc aaaaagatgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     G - C          T T
                    T     T C A C C     A
        G A        A      + | | | |     A
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A   C
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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