The detailed information of tRNA gene sequence


Sequence ID>SRA1008239
Genome IDSRR020490.275901
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 232
End posion on genome 155
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnttgt
tRNA gene sequence 
CGGCTCGTAGCGCAGCCTGGTTAGCGCGCCTCGTTCGGGACGAGGAAGTCGGAGGTTCGA
ATCCTCTCGAGCCGACCA
Downstream region at tRNA end position 
ttacttttca
Secondary structure (Cloverleaf model)
>SRA1008239	Pro	CGG
                   t      ACCA ttacttttca
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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