The detailed information of tRNA gene sequence


Sequence ID>SRA1008241
Genome IDSRR020490.276943
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 220
End posion on genome 143
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttaatttaa
tRNA gene sequence 
GGGCCTGTAGCTCAGTCTGGTTAGAGCAACGGACTCATAATCCGTCGGTCGCAGGTTCGA
GTCCTGCCGGGCCCACTA
Downstream region at tRNA end position 
tatgaaaggt
Secondary structure (Cloverleaf model)
>SRA1008241	Met	CAT
                   a      ACTA tatgaaaggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
    C T G A        A      | | | | |     G
  T         C T C G       G C A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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