The detailed information of tRNA gene sequence


Sequence ID>SRA1008249
Genome IDSRR020490.278957
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 86
End posion on genome 161
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taaaaagcga
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGAAGAGCACCTGCTTTGCAAGCAGGGGGTCGTGGGTTCAAGT
CCCATCATCTCCACAA
Downstream region at tRNA end position 
taaggtaatc
Secondary structure (Cloverleaf model)
>SRA1008249	Ala	TGC
                   a      ACAA taaggtaatc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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