The detailed information of tRNA gene sequence


Sequence ID>SRA1008254
Genome IDSRR020490.282348
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 174
End posion on genome 250
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atttcccttt
tRNA gene sequence 
CGGGGCATAGCGCAGTCTGGTAGCGCACCTGGTTTGGGACCAGGTGGTCGCAGGTTCAAA
TCCTGCTGCCCCGACCA
Downstream region at tRNA end position 
gcgccagtag
Secondary structure (Cloverleaf model)
>SRA1008254	Pro	TGG
                   t      ACCA gcgccagtag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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