The detailed information of tRNA gene sequence


Sequence ID>SRA1008267
Genome IDSRR020490.287446
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 86
End posion on genome 162
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgttcgcgc
tRNA gene sequence 
GGGGGCGTAGCTCAATTGGTTAGAGCGCTGCCCTGTCACGGCAGAGGTTGCGGGTTCGAG
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ttttttctca
Secondary structure (Cloverleaf model)
>SRA1008267	Asp	GTC
                   c      GCCA ttttttctca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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