The detailed information of tRNA gene sequence


Sequence ID>SRA1008271
Genome IDSRR020490.289252
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 12
End posion on genome 89
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcccaccagt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGA
GTCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
ctttagggtt
Secondary structure (Cloverleaf model)
>SRA1008271	Asp	GTC
                   t      GCCA ctttagggtt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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