The detailed information of tRNA gene sequence


Sequence ID>SRA1008279
Genome IDSRR020490.293270
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 171
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taattctaac
tRNA gene sequence 
GCCGGTGTAGCTCAGGGGTAGAGCAACTGATTCGTAACCAGTAGGTCGGTGGTTCAATTC
CACTCATCGGCAtcg
Downstream region at tRNA end position 
attaagccta
Secondary structure (Cloverleaf model)
>SRA1008279	Thr	CGT
                   c      Atcg attaagccta
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     G - C          T T
                    T     T C A C C     A
        G A        A      + | | | |     A
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A   C
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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