The detailed information of tRNA gene sequence


Sequence ID>SRA1008288
Genome IDSRR020490.297509
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 15
End posion on genome 96
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaattcgtg
tRNA gene sequence 
GACACTGTGGCCGAGTGGTTAAGGCGTTGGCCTGCTAAGCCAATGGGCTCTGCCCGCGTG
GGTTCGAATCCCATCGGTGTCGttt
Downstream region at tRNA end position 
tatcatattt
Secondary structure (Cloverleaf model)
>SRA1008288	Ser	GCT
                   g      Gttt tatcatattt
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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