The detailed information of tRNA gene sequence


Sequence ID>SRA1008291
Genome IDSRR020490.298052
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 29
End posion on genome 104
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttgcttggtt
tRNA gene sequence 
GCCGGGCTAGCTCAATTGGTAGAGCAGTTGACTCTTAATCAATTGGTTCGGGGTTCGAGT
CCCCGGCCCGGTACCA
Downstream region at tRNA end position 
gcagaaaaca
Secondary structure (Cloverleaf model)
>SRA1008291	Lys	CTT
                   t      ACCA gcagaaaaca
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G          T G
                    T     G C C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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