The detailed information of tRNA gene sequence


Sequence ID>SRA1008292
Genome IDSRR020490.298294
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 255
End posion on genome 328
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttttcttatg
tRNA gene sequence 
CGGAACGTAGCGCAGCATGGTAGCGCACTGGTCTGGGGGACCAGGGGTCGTCGGTTCAAA
TCCGGCCGTTCCGAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1008292	Pro	GGG
                   g      Annn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     A
    A       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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