The detailed information of tRNA gene sequence


Sequence ID>SRA1008313
Genome IDSRR020490.309258
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 203
End posion on genome 279
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgaaaatt
tRNA gene sequence 
AGGTGAGTAGTTCAATTGGTAGAGCATCGGCCTCCAAAGCCGGGGAGTTGAGGGTTCGAG
TCCTTCCTCACCTGCTA
Downstream region at tRNA end position 
tagnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1008313	Trp	CCA
                   t      GCTA tagnnnnnnn
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GGAGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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