The detailed information of tRNA gene sequence


Sequence ID>SRA1008332
Genome IDSRR020490.316809
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 82
End posion on genome 171
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acttattcta
tRNA gene sequence 
GGAGGGATCGCATAGTCTGGCCTAGTGCGCGACACTCGAAATGTCGTGAGTCTTTATAGG
CTCCGTGGGTTCGAATCCCACTCCCTCCGCtt
Downstream region at tRNA end position 
taaacttcag
Secondary structure (Cloverleaf model)
>SRA1008332	Ser	CGA
                   a      GCtt taaacttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TGAGTCTTTATAGGCTCC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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