The detailed information of tRNA gene sequence


Sequence ID>SRA1008339
Genome IDSRR020490.318315
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 232
End posion on genome 307
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttatccttaC
tRNA gene sequence 
GGGGCGGTGGTAAAGTCTGGAGTTTACGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGA
ATCCCGTCGTCCCCGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1008339	Asp	GTC
                   C      CGnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G + T          A A
                    T     G C C C T     G
    C T G A        G      | |   | +     C
  T         A A T G       C G C G G     T
  G         | | | |                 G T
  G         T T A C
    A G T          G     AGGT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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