The detailed information of tRNA gene sequence


Sequence ID>SRA1008344
Genome IDSRR020490.320158
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 200
End posion on genome 109
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agataaaatg
tRNA gene sequence 
GGAGAGATGGGTGAGTGGCTTAAACCAGCAGTTTGCTAAATTGCCGAAGGGAGCAATCCT
TTCCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaataaaata
Secondary structure (Cloverleaf model)
>SRA1008344	Ser	GCT
                   g      GCCA aaataaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G T G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGAAGGGAGCAATCCTTTCC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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