The detailed information of tRNA gene sequence


Sequence ID>SRA1008346
Genome IDSRR020490.321025
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 89
End posion on genome 162
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tctctatgtt
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT
CCGCTTACCTCCACtg
Downstream region at tRNA end position 
aataccacct
Secondary structure (Cloverleaf model)
>SRA1008346	Ala	TGC
                   t      ACtg aataccacct
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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