The detailed information of tRNA gene sequence


Sequence ID>SRA1008353
Genome IDSRR020490.323738
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 156
End posion on genome 246
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttcttcaag
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCACTGGTCTTGAAAACCAGCAACGGGGGAAACTCG
TTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaagaatttc
Secondary structure (Cloverleaf model)
>SRA1008353	Ser	TGA
                   g      GCCA gaagaatttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAACGGGGGAAACTCGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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