The detailed information of tRNA gene sequence


Sequence ID>SRA1008386
Genome IDSRR020490.336840
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 188
End posion on genome 100
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attttagttt
tRNA gene sequence 
GGAGGGATGGCCGAGCGGACGAAGGCGTTAGTCTTGAAAACTAATGTATGTATTCCATAC
CGTGGGTTCGAATCCCACTCCCTCCGCAA
Downstream region at tRNA end position 
gcttggagag
Secondary structure (Cloverleaf model)
>SRA1008386	Ser	TGA
                   t      GCAA gcttggagag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGTATGTATTCCATACC
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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