The detailed information of tRNA gene sequence


Sequence ID>SRA1008392
Genome IDSRR020490.341108
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 176
End posion on genome 100
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gcaaacctca
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGTTAGAGCGCATGCATGACACGCATGAGGTCACTGGTTCGAC
TCCAGTATCTCCCACCA
Downstream region at tRNA end position 
ttttggttca
Secondary structure (Cloverleaf model)
>SRA1008392	Val	GAC
                   a      ACCA ttttggttca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A          T C
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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