The detailed information of tRNA gene sequence


Sequence ID>SRA1008393
Genome IDSRR020490.341781
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 226
End posion on genome 150
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gagggttgct
tRNA gene sequence 
GCCTCAGTAGCTCAGACTGGTAGAGCATCTGATTTGTAATCAGACGGCCGGGGGTTCGAA
TCCCTCCTGGGGCTCCA
Downstream region at tRNA end position 
ttttctcctc
Secondary structure (Cloverleaf model)
>SRA1008393	Thr	TGT
                   t      TCCA ttttctcctc
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     CGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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