The detailed information of tRNA gene sequence


Sequence ID>SRA1008394
Genome IDSRR020490.341821
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 121
End posion on genome 45
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agcaaataag
tRNA gene sequence 
CGGGGAGTAGCGCAGCCTGGTAGCGCATCTGTTTTGGGAACAGAGGGTCGCAGGTTCAAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
gtttttggag
Secondary structure (Cloverleaf model)
>SRA1008394	Pro	TGG
                   g      ACCA gtttttggag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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