The detailed information of tRNA gene sequence


Sequence ID>SRA1008399
Genome IDSRR020490.344914
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 83
End posion on genome 173
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atagaagaag
tRNA gene sequence 
GGAGAGGTGGCAGAGCCTGGCTGAATGCGCCGCACTCGAAATGCGGTATACACCTAGTGT
ATCGGGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
atgaaaaaaa
Secondary structure (Cloverleaf model)
>SRA1008399	Ser	CGA
                   g      GCAA atgaaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATACACCTAGTGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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