The detailed information of tRNA gene sequence


Sequence ID>SRA1008405
Genome IDSRR020490.346384
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 181
End posion on genome 255
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaactaccat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGTTCGATTC
CCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aaaggataaa
Secondary structure (Cloverleaf model)
>SRA1008405	Trp	CCA
                   t      GCCA aaaggataaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A        + | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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