The detailed information of tRNA gene sequence


Sequence ID>SRA1008407
Genome IDSRR020490.346509
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 45
End posion on genome 131
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttaatttag
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCAGCACTGGAAATGCTGTATAGGGGCAACCCTA
TCGAGGGTTCGAATCCCTCTCTCTCCGttc
Downstream region at tRNA end position 
ctaaaggtcg
Secondary structure (Cloverleaf model)
>SRA1008407	Ser	GGA
                   g      Gttc ctaaaggtcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGGCAACCCTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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