The detailed information of tRNA gene sequence


Sequence ID>SRA1008417
Genome IDSRR020490.350891
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 177
End posion on genome 103
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aggttgctac
tRNA gene sequence 
GGGTGTATAGCTCAGTTGGTTAGAGCGCGCGCCTGATAAGCGCGAGGTCCCAAGTTCAAC
TCTTGGTACGCCCACtt
Downstream region at tRNA end position 
tgtgggggcg
Secondary structure (Cloverleaf model)
>SRA1008417	Ile	GAT
                   c      ACtt tgtgggggcg
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     T - A
                     A - T          T C
                    T     G G T T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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