The detailed information of tRNA gene sequence


Sequence ID>SRA1008419
Genome IDSRR020490.351119
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 111
End posion on genome 187
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtaaagaat
tRNA gene sequence 
TAGGGTGTAGCTCTAATTGGCAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGAGTTCGAA
TCTCACCACCCCTGCTA
Downstream region at tRNA end position 
gaggtaatta
Secondary structure (Cloverleaf model)
>SRA1008419	Trp	CCA
                   t      GCTA gaggtaatta
                     T   T
                     A   C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A C T C     A
      A A T        A      | | | | |     G
    T       C T C G       G T G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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