The detailed information of tRNA gene sequence


Sequence ID>SRA1008431
Genome IDSRR020490.357359
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 233
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acctttcggt
tRNA gene sequence 
GGACAGGTGGCCGAGCGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCGGGAAACTGCC
TCGAGGGTTCGAATCCCTTCCTGTCCGCCA
Downstream region at tRNA end position 
caacacctct
Secondary structure (Cloverleaf model)
>SRA1008431	Ser	GCT
                   t      GCCA caacacctct
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACTGCCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK