The detailed information of tRNA gene sequence


Sequence ID>SRA1008437
Genome IDSRR020490.358953
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 127
End posion on genome 52
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgttattt
tRNA gene sequence 
AGGTGAGTAGTTCAATTGGTAGAGCACCGGCCTCCAAAGCCGGGAGTTGAGGGTTCGAGT
CCTTCCTCACCTGCAA
Downstream region at tRNA end position 
ggctgggtgc
Secondary structure (Cloverleaf model)
>SRA1008437	Trp	CCA
                   t      GCAA ggctgggtgc
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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