The detailed information of tRNA gene sequence


Sequence ID>SRA1008440
Genome IDSRR020490.360302
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 98
End posion on genome 24
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattaatgat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAA
TCCTTCCCCCGCTACtt
Downstream region at tRNA end position 
aaaaaaaccc
Secondary structure (Cloverleaf model)
>SRA1008440	Met	CAT
                   t      ACtt aaaaaaaccc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | + | | |     G
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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