The detailed information of tRNA gene sequence


Sequence ID>SRA1008468
Genome IDSRR020490.378108
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 187
End posion on genome 262
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cccccttttT
tRNA gene sequence 
GGGCATGTAGCTCAGTTGGATAGAGCATCAGATTCCGGTTCTGAGAGTCGGGGGTTCAAA
TCCCTCCATGCTCGTga
Downstream region at tRNA end position 
aattattttt
Secondary structure (Cloverleaf model)
>SRA1008468	Arg	CCG
                   T      GTga aattattttt
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GAGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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