The detailed information of tRNA gene sequence


Sequence ID>SRA1008470
Genome IDSRR020490.378509
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 170
End posion on genome 245
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aaacgaacgt
tRNA gene sequence 
GCCCGGTTAGCTCAGTTGGTAGAGCAAGGGACTGAAAATCCCTGTGTCCTTGGTTCAAGT
CCGAGACTGGGCACCA
Downstream region at tRNA end position 
cgtatctccc
Secondary structure (Cloverleaf model)
>SRA1008470	Phe	GAA
                   t      ACCA cgtatctccc
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     T - A          T G
                    T     G A G C C     A
      T G A        A      | | + | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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