The detailed information of tRNA gene sequence


Sequence ID>SRA1008478
Genome IDSRR020490.383485
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 260
End posion on genome 185
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTATCCTCCACCA
Downstream region at tRNA end position 
ggtcattttc
Secondary structure (Cloverleaf model)
>SRA1008478	Ala	TGC
                   n      ACCA ggtcattttc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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